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The links below are to the latest copies of the protocols, SOPs and training materials

Whole Genome Sequencing (Wet-lab)

Methods and workflows as developed for “Empowering microbiology laboratories in emerging economies with scalable genome sequencing for routine pathogen surveillance” CID manuscript

  1. Genomic DNA Isolation
  2. DNA Library Preparation
  3. Library Normalisation and Pooling
  4. Whole Genome Sequencing
  5. DNA Sample Transport


Methods used for the “Overcoming data bottlenecks in pathogen genomic surveillance” CID manuscript

Bioinformatics Training Materials